The only formal way to enter by land is at the Entikong-Tebedu crossing between West Kalimantan and Sarawak, Malaysia on Borneo. The crossing in on the main route between Kuching, (Sarawak) and Pontianak, the capital of (West Kalimantan). As the crossing is listed only as a visa-free entry point, nationalities who do not qualify for this will have to apply for visas beforehand.

Other recognized but informal crossings to enter by land are:

• From Vanimo (Papua New Guinea) to Jayapura, the capital of Indonesian Papua.
• Mota'ain between Batugade in East Timor and Atambua, West Timor.

Note: It is not guaranteed that yo will be able to enter Indonesia through these crossings and non-Indonesians are required to apply for visas at the nearest Indonesian Embassy or Consulate.